STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_08435Thrombospondin type-1 domain-containing protein 4. (1027 aa)    
Predicted Functional Partners:
N303_13972
Tissue factor pathway inhibitor 2.
 
 
  
 0.707
N303_02122
Beta-1,3-glucosyltransferase.
     
 0.664
N303_01532
GDP-fucose protein O-fucosyltransferase 2.
     
 0.611
N303_10747
Spondin-1.
     
0.567
N303_09586
Spondin-2.
     
 0.519
N303_08821
Fibrillin-1.
    
 0.456
N303_07894
Uridine 5'-monophosphate synthase.
      
 0.416
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.