STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_00570Vacuolar protein-sorting-associated protein 25. (135 aa)    
Predicted Functional Partners:
N303_09006
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.999
N303_10219
Vacuolar protein-sorting-associated protein 36.
   
 0.999
N303_08545
Charged multivesicular body protein 6.
   
 0.997
N303_15579
Vacuolar protein sorting-associated protein 28; Belongs to the VPS28 family.
   
 0.990
N303_15639
Protein Njmu-R1.
   
 0.972
N303_13565
Vacuolar protein sorting-associated protein 37B.
    
 0.934
N303_15246
Charged multivesicular body protein 2a.
   
 0.931
N303_02692
Vacuolar protein sorting-associated protein 37A.
    
 0.904
N303_06258
Multivesicular body subunit 12B.
    
 0.896
N303_00154
Tumor susceptibility 101.
   
 0.889
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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