STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_05857TP53RK-binding protein; Belongs to the CGI121/TPRKB family. (175 aa)    
Predicted Functional Partners:
N303_14086
TP53-regulating kinase.
   
 0.998
N303_01655
Peptidase_M22 domain-containing protein.
    
 0.989
N303_06837
Nucleoporin Nup43.
    
   0.604
N303_10752
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
      
 0.554
N303_14635
Fanconi anemia group M protein.
      
 0.546
N303_01792
MAP3K12-binding inhibitory protein 1.
    
   0.444
N303_09487
Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.
   
    0.439
N303_10757
YrdC-like domain-containing protein.
      
 0.408
N303_03391
YrdC-like domain-containing protein.
      
 0.408
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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