STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_08421Krueppel-like factor 13. (277 aa)    
Predicted Functional Partners:
N303_13499
Adenylate kinase 9.
    
  0.843
N303_13498
Adenylate kinase 9.
    
  0.843
N303_15052
Paired amphipathic helix protein Sin3b.
    
 
 0.569
N303_04280
Paired amphipathic helix protein Sin3a.
    
 
 0.569
N303_04606
BRCA1-associated RING domain protein 1.
    
 0.551
N303_03027
Speckle-type POZ protein-like.
   
  0.527
N303_08707
Ragulator complex protein LAMTOR2.
   
  0.521
N303_07593
Ribosomal_S10 domain-containing protein.
   
  0.508
N303_14214
Suppressor of fused.
    
 0.502
N303_00137
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
  0.500
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.