STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_05483Chloride channel protein. (760 aa)    
Predicted Functional Partners:
N303_13513
Osteopetrosis-associated transmembrane protein 1.
    
 0.771
N303_06836
Serine/threonine-protein kinase LATS1.
    
 0.693
N303_04094
Non-specific serine/threonine protein kinase.
    
 0.684
N303_07620
Tyrosine-protein phosphatase non-receptor type 14.
    
 
 0.577
N303_06527
Polycomb group RING finger protein 3.
 
    
 0.550
N303_03487
Intersectin-2.
      
 0.544
N303_08036
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.
    
 
 0.498
N303_09320
Merlin.
     
 0.489
N303_13022
Merlin.
     
 0.489
N303_01162
FERM domain-containing protein 6.
     
 0.484
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.