STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_09557Ribose-5-phosphate isomerase. (218 aa)    
Predicted Functional Partners:
N303_01552
Ribulose-phosphate 3-epimerase.
  
 0.962
N303_05693
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.957
N303_08693
Transketolase.
   
 0.951
N303_06753
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
    
 0.948
N303_02571
6-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family.
   
 
 0.931
N303_15805
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.926
N303_05764
Sorbitol dehydrogenase.
     
 0.915
N303_09434
Phosphoglucomutase-1; Belongs to the phosphohexose mutase family.
  
 
 0.910
N303_07554
Phosphoglucomutase-like 5.
  
 
 0.906
N303_04548
Ribokinase; Belongs to the carbohydrate kinase PfkB family.
    
 0.906
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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