STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_01152Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (139 aa)    
Predicted Functional Partners:
N303_11427
Vesicle transport protein GOT1A.
   
 
 0.609
N303_06873
TIP41-like.
 
    
 0.597
N303_13775
Vesicle transport protein GOT1B.
   
 
 0.590
N303_12487
Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.
    
 
 0.573
N303_10210
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.516
N303_12420
Golgi SNAP receptor complex member 1.
   
 
 0.418
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.