STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_09755Myosin light chain 1, cardiac muscle. (153 aa)    
Predicted Functional Partners:
N303_12101
Myosin regulatory light chain 2B, cardiac muscle isoform.
   
0.920
N303_14413
Myosin regulatory light chain 2A, cardiac muscle isoform.
   
0.920
N303_11487
Peripheral plasma membrane protein CASK.
    
 0.863
N303_13384
Actin, alpha skeletal muscle.
   
 0.862
N303_10573
Actin, alpha cardiac muscle 1.
   
 0.862
N303_06464
Troponin I, slow skeletal muscle.
   
 0.846
N303_11956
Myosin light chain kinase 2, skeletal/cardiac muscle.
   
 0.846
N303_00180
Troponin I, fast skeletal muscle.
   
 0.845
N303_03250
Myosin-6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.841
N303_01458
Myosin-7B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.841
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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