STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_01226O-acetyl-ADP-ribose deacetylase MACROD2. (115 aa)    
Predicted Functional Partners:
N303_13821
Poly [ADP-ribose] polymerase 1.
    
 
 0.569
N303_06009
Poly(ADP-ribose) glycohydrolase ARH3.
    
 
 0.514
N303_07880
E3 ubiquitin-protein ligase DTX3L.
   
 
 0.513
N303_01235
Aprataxin and PNK-like factor.
    
 
 0.508
N303_06496
Uncharacterized protein.
  
 0.505
N303_00474
Histone deacetylase 11.
   
  0.496
N303_10673
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.428
N303_12690
Histone deacetylase 1.
    
  0.428
N303_11858
Histone deacetylase 2.
    
  0.428
N303_07529
SET-binding protein.
   
 
 0.423
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.