STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_12441Transient receptor potential cation channel subfamily V member 3; Belongs to the transient receptor (TC 1.A.4) family. (787 aa)    
Predicted Functional Partners:
N303_12439
Sedoheptulokinase.
 
    
 0.770
N303_10705
cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.
    
 0.716
N303_14737
Transient receptor potential cation channel subfamily A member 1.
     
0.652
N303_10538
Transient receptor potential cation channel subfamily M member 3.
   
 
 0.621
N303_00168
Transient receptor potential cation channel subfamily M member 5.
   
 
 0.579
N303_13172
Tyrosine-protein kinase.
    
 0.560
N303_08027
Calmodulin; Belongs to the calmodulin family.
    
 
 0.560
N303_00996
Calmodulin, striated muscle; Belongs to the calmodulin family.
    
 
 0.560
N303_01561
Tyrosine-protein kinase.
    
 0.560
N303_04542
Calmodulin; Belongs to the calmodulin family.
    
 
 0.560
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.