STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_08791Lamin-L(III); Belongs to the intermediate filament family. (531 aa)    
Predicted Functional Partners:
N303_01849
Caspase-6; Belongs to the peptidase C14A family.
    
 0.871
N303_13683
Lamin-B2; Belongs to the intermediate filament family.
  
  
0.824
N303_06544
Lamin-B1; Belongs to the intermediate filament family.
     
0.823
N303_09524
Inner nuclear membrane protein Man1.
    
 0.756
N303_01059
Centromere protein U.
    
 0.685
N303_15767
Caspase-2; Belongs to the peptidase C14A family.
    
 0.685
N303_12484
Caspase-3; Belongs to the peptidase C14A family.
    
 0.685
N303_14071
RNA-binding protein 39.
   
 0.674
N303_09915
SUN domain-containing protein 2.
    
 0.631
N303_07075
SUN domain-containing protein 1.
    
 0.631
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.