STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_01419Protein fantom. (1220 aa)    
Predicted Functional Partners:
N303_05625
Nephrocystin-4.
    
 0.963
N303_11474
X-linked retinitis pigmentosa GTPase regulator.
    
 
 0.781
N303_08709
Ras-related protein Rab-11A.
   
 0.717
N303_13671
Ras-related protein Rab-11B.
   
 0.717
N303_01883
Ras-related protein Rab-11A.
   
 0.717
N303_14709
Mitochondrial fission regulator 1.
    
 0.681
N303_14540
Coiled-coil domain-containing protein 174.
    
 0.681
N303_12884
Rho-related GTP-binding protein RhoB.
   
 0.649
N303_09535
Rho-related GTP-binding protein RhoG.
   
 0.649
N303_01669
Rho-related BTB domain-containing protein 1.
   
 0.649
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.