STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_00328Transmembrane protein 53-B. (242 aa)    
Predicted Functional Partners:
N303_07637
Acyl-CoA-binding domain-containing protein 6.
      
 0.543
N303_05933
Aspartate beta-hydroxylase domain-containing protein 2.
      
 0.543
N303_02122
Beta-1,3-glucosyltransferase.
      
 0.542
N303_15467
DNA repair protein XRCC3.
      
 0.506
N303_10734
Paired box protein Pax-6.
      
 0.491
N303_00326
ERI1 exoribonuclease 3.
      
 0.472
N303_00327
E3 ubiquitin-protein ligase RNF220.
      
 0.468
N303_06879
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
      
 0.446
N303_00324
DNA methyltransferase 1-associated protein 1.
      
 0.410
N303_07928
Kinesin-associated protein 3.
      
 0.408
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.