N303_14234 protein (Cuculus canorus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

N303_14234

Folliculin-interacting protein 2. (1107 aa)

Predicted Functional Partners:

N303_00807

0.995

N303_03397

0.951

N303_00277

0.942

N303_07362

0.942

N303_10920

0.936

N303_12926

0.908

N303_00976

0.877

N303_08707

0.858

N303_10391

0.633

N303_00349

0.578

Your Current Organism:

Cuculus canorus

NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N303_00277	N303_00349	A0A091FNX8	A0A091FLN6	Ras-related GTP-binding protein D.	Menin.	0.418
N303_00277	N303_00807	A0A091FNX8	A0A091G952	Ras-related GTP-binding protein D.	Folliculin.	0.965
N303_00277	N303_00976	A0A091FNX8	A0A091GJY0	Ras-related GTP-binding protein D.	Ragulator complex protein LAMTOR3.	0.962
N303_00277	N303_03397	A0A091FNX8	A0A091GLF7	Ras-related GTP-binding protein D.	Ras-related GTP-binding protein A.	0.988
N303_00277	N303_07362	A0A091FNX8	A0A091GDL9	Ras-related GTP-binding protein D.	Ras-related GTP-binding protein C.	0.830
N303_00277	N303_08707	A0A091FNX8	A0A091GB41	Ras-related GTP-binding protein D.	Ragulator complex protein LAMTOR2.	0.968
N303_00277	N303_10391	A0A091FNX8	A0A091FP60	Ras-related GTP-binding protein D.	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	0.630
N303_00277	N303_10920	A0A091FNX8	A0A091FK90	Ras-related GTP-binding protein D.	Folliculin-interacting protein 1.	0.846
N303_00277	N303_12926	A0A091FNX8	A0A091GBL1	Ras-related GTP-binding protein D.	Ragulator complex protein LAMTOR5.	0.968
N303_00277	N303_14234	A0A091FNX8	A0A091FYX5	Ras-related GTP-binding protein D.	Folliculin-interacting protein 2.	0.942
N303_00349	N303_00277	A0A091FLN6	A0A091FNX8	Menin.	Ras-related GTP-binding protein D.	0.418
N303_00349	N303_00807	A0A091FLN6	A0A091G952	Menin.	Folliculin.	0.738
N303_00349	N303_03397	A0A091FLN6	A0A091GLF7	Menin.	Ras-related GTP-binding protein A.	0.550
N303_00349	N303_07362	A0A091FLN6	A0A091GDL9	Menin.	Ras-related GTP-binding protein C.	0.418
N303_00349	N303_14234	A0A091FLN6	A0A091FYX5	Menin.	Folliculin-interacting protein 2.	0.578
N303_00807	N303_00277	A0A091G952	A0A091FNX8	Folliculin.	Ras-related GTP-binding protein D.	0.965
N303_00807	N303_00349	A0A091G952	A0A091FLN6	Folliculin.	Menin.	0.738
N303_00807	N303_00976	A0A091G952	A0A091GJY0	Folliculin.	Ragulator complex protein LAMTOR3.	0.880
N303_00807	N303_03397	A0A091G952	A0A091GLF7	Folliculin.	Ras-related GTP-binding protein A.	0.985
N303_00807	N303_07362	A0A091G952	A0A091GDL9	Folliculin.	Ras-related GTP-binding protein C.	0.965