STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_10291Chordin. (54 aa)    
Predicted Functional Partners:
N303_03980
Bone morphogenetic protein 4.
    
 0.916
N303_01207
TGF_BETA_2 domain-containing protein.
    
 0.915
N303_12887
Growth/differentiation factor 6.
    
 0.908
N303_00743
Bone morphogenetic protein 7.
    
 0.867
N303_07664
Bone morphogenetic protein 6.
    
 0.861
N303_04760
Bone morphogenetic protein 5.
    
 0.861
N303_01438
Growth/differentiation factor 5.
    
 0.854
N303_07007
Bone morphogenetic protein 2.
   
 0.849
N303_09201
Bone morphogenetic protein 7.
   
 0.846
N303_12660
Bone morphogenetic protein 8B.
    
 0.842
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.