STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_13029Meckel syndrome type 1 protein. (468 aa)    
Predicted Functional Partners:
N303_05125
B9 domain-containing protein 1.
    
 0.935
N303_09960
Coiled-coil and C2 domain-containing protein 2A.
    
 0.905
N303_14417
Tectonic-1.
    
 0.890
N303_06376
Meckelin.
     
 0.869
N303_05659
Transmembrane protein 216.
     
 0.858
N303_05695
Transmembrane protein 80.
     
 0.739
N303_07168
26S proteasome non-ATPase regulatory subunit 14.
 
      0.733
N303_10403
Transmembrane protein 231.
    
 
 0.685
N303_04423
Protein FAM86A.
    
 0.676
N303_13107
LYR motif-containing protein 1; Belongs to the complex I LYR family.
    
 0.676
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.