STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_07579Uncharacterized protein. (197 aa)    
Predicted Functional Partners:
N303_02918
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.822
N303_00350
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.787
N303_07654
LYR motif-containing protein 4; Belongs to the complex I LYR family.
    
 0.704
N303_04606
BRCA1-associated RING domain protein 1.
    
 0.704
N303_04618
V(D)J recombination-activating protein 2.
   
 0.693
N303_02102
60S ribosomal protein L21.
   
   0.645
N303_15305
BRISC and BRCA1-A complex member 1.
    
 0.640
N303_15335
Ubiquitin-60S ribosomal protein L40.
    
  0.637
N303_09488
BRCA1-A complex subunit Abraxas.
    
 0.636
N303_11545
Ubiquitin-40S ribosomal protein S27a.
    
  0.616
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.