STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_09485Heparanase. (492 aa)    
Predicted Functional Partners:
N303_12881
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.870
N303_14161
Inactive heparanase-2.
  
  
 
0.835
N303_06355
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.639
N303_00400
Hepatocyte growth factor-regulated tyrosine kinase substrate.
      
 0.574
N303_08367
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.551
N303_13060
Basement membrane-specific heparan sulfate proteoglycan core protein.
     
 0.542
N303_14081
Extracellular sulfatase.
     
 0.512
N303_14729
Extracellular sulfatase.
     
 0.500
N303_09486
Helicase POLQ-like.
 
   
  0.486
N303_14113
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.423
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.