STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_00373WD repeat domain phosphoinositide-interacting protein 3. (322 aa)    
Predicted Functional Partners:
N303_15522
Autophagy-related protein 2 B.
    
 
 0.823
N303_00567
Beclin-1.
    
 
 0.650
N303_15609
WD repeat domain phosphoinositide-interacting protein 1.
   
0.645
N303_00833
WD repeat domain phosphoinositide-interacting protein 2.
   
0.645
N303_15485
Tectonin beta-propeller repeat-containing protein 2.
   
  
 0.629
N303_03667
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
  
 0.607
N303_13524
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.573
N303_00556
Next to BRCA1 1.
      
 0.566
N303_04813
Ubiquitin-like ATG12.
      
 0.563
N303_06884
Autophagy-related protein 3.
   
  
 0.555
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.