STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_04958Glycosaminoglycan xylosylkinase. (409 aa)    
Predicted Functional Partners:
N303_07070
Extracellular serine/threonine protein kinase FAM20C.
  
 
0.818
N303_09916
Extracellular serine/threonine protein kinase FAM20C.
    
0.814
N303_10683
Epithelial chloride channel protein.
   
 
  0.604
N303_06355
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.579
N303_08267
Disintegrin and metalloproteinase domain-containing protein 10.
   
 
  0.564
N303_10735
Reticulocalbin-1.
     
 0.562
N303_08071
Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
  0.549
N303_14902
Membrane-bound transcription factor site-1 protease.
     
 0.549
N303_15260
Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
  0.549
N303_07640
Sulfhydryl oxidase.
     
 0.543
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.