STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_12098PRKR-interacting protein 1. (148 aa)    
Predicted Functional Partners:
N303_08873
Pre-mRNA-splicing factor SLU7.
   
 0.967
N303_13494
Pre-mRNA-processing factor 17.
    
 0.951
N303_15043
Protein FAM32A.
    
 0.948
N303_13817
Protein SDE2.
    
 0.931
N303_07999
NKAP-like.
   
 0.913
N303_11431
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
   0.911
N303_09635
Small nuclear ribonucleoprotein G.
    
   0.903
N303_15088
Pre-mRNA-splicing factor SYF2.
   
  0.899
N303_12939
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.894
N303_07285
Pre-mRNA-splicing factor CWC22.
    
 0.893
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.