STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_03478ATPase family AAA domain-containing protein 2B. (968 aa)    
Predicted Functional Partners:
N303_03477
ATPase family AAA domain-containing protein 2B.
 
      0.900
N303_08584
26S proteasome non-ATPase regulatory subunit 6.
   
 0.854
N303_15622
26S proteasome non-ATPase regulatory subunit 12.
   
 0.840
N303_15436
Myelomonocytic growth factor.
   
 0.838
N303_12851
26S proteasome non-ATPase regulatory subunit 11.
   
 0.838
N303_08911
Proteasome endopeptidase complex.
 
 
 0.825
N303_12727
Proteasomal ubiquitin receptor ADRM1.
   
 0.816
N303_01739
26S proteasome non-ATPase regulatory subunit 4.
   
 0.809
N303_00696
26S proteasome non-ATPase regulatory subunit 1.
   
 0.799
N303_09412
Histone H2A deubiquitinase MYSM1.
   
 0.799
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.