STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_12635Grainyhead-like 3. (593 aa)    
Predicted Functional Partners:
N303_09001
Homeobox protein Hox-B6.
    
 
 0.507
N303_14875
E3 ubiquitin-protein ligase RING2.
    
   0.441
N303_03998
TATA-box-binding protein.
    
  0.436
N303_03555
TATA-box-binding protein.
    
  0.436
N303_03655
60S ribosomal protein L37a.
 
   
  0.424
N303_10830
Kin of IRRE-like 3.
    
  0.407
N303_13302
Rho GTPase-activating protein 29.
      
 0.406
N303_08915
Uncharacterized protein.
    
 
 0.403
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.