STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_14425Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. (601 aa)    
Predicted Functional Partners:
N303_12592
Vacuolar protein sorting-associated protein 16.
   
 0.999
N303_08131
Vacuolar protein sorting-associated protein 18.
   
 0.999
N303_08924
Vacuolar protein sorting-associated protein 41.
    
 0.998
N303_10862
Vacuolar protein sorting-associated protein 11.
   
 0.998
N303_08204
Vam6/Vps39-like.
   
 0.998
N303_07464
Transforming growth factor-beta receptor-associated protein 1.
   
 0.997
N303_01045
Vesicle-associated membrane protein 8.
   
 
 0.977
N303_13078
Vacuolar fusion protein CCZ1.
    
 
 0.977
N303_05183
Vesicle transport through interaction with t-SNAREs 1A.
   
 
 0.976
N303_12487
Synaptobrevin YKT6-B; Belongs to the synaptobrevin family.
   
 
 0.971
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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