STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_08570Cleavage and polyadenylation specificity factor subunit 4. (165 aa)    
Predicted Functional Partners:
N303_05230
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.982
N303_06604
E3 ubiquitin-protein ligase RBBP6.
    
 0.982
N303_03159
Pre-mRNA 3' end processing protein WDR33.
    
 0.982
N303_10498
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.982
N303_04910
Symplekin.
    
 0.971
N303_15518
Poly(A) polymerase alpha.
    
 0.969
N303_10518
Cleavage stimulation factor subunit 2.
   
 0.968
N303_02719
Pre-mRNA 3'-end-processing factor FIP1.
    
 0.955
N303_11833
Pre-mRNA 3'-end-processing factor FIP1.
    
 0.954
N303_10744
Cleavage stimulation factor subunit 3.
    
 0.929
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.