STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_02546Polynucleotide 5'-hydroxyl-kinase NOL9. (311 aa)    
Predicted Functional Partners:
N303_04897
WD repeat-containing protein 18.
   
 0.987
N303_06707
Ribosomal biogenesis protein LAS1L.
   
 0.963
N303_06706
Ribosomal biogenesis protein LAS1L.
   
 0.963
N303_04993
Testis-expressed sequence 10 protein.
   
 0.956
N303_10296
Sentrin-specific protease 5.
   
 0.927
N303_11714
Ribosome biogenesis protein bop1.
   
 
 0.839
N303_08494
Ribosome biogenesis protein WDR12.
   
 0.828
N303_13421
HEAT repeat-containing protein 1.
   
 
  0.779
N303_09303
Pescadillo.
   
 
  0.743
N303_08653
Guanine nucleotide-binding protein-like 3.
   
 
 0.717
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.