STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_13291tRNA wybutosine-synthesizing protein 3. (97 aa)    
Predicted Functional Partners:
N303_00762
tRNA (Guanine(37)-N1)-methyltransferase.
  
 
 0.761
N303_10517
tRNA wybutosine-synthesizing protein 2.
  
 
 0.755
N303_12605
tRNA wybutosine-synthesizing protein 1.
  
  
 0.683
N303_01837
Leucine carboxyl methyltransferase 2.
   
  
 0.590
N303_04628
Lengsin; Belongs to the glutamine synthetase family.
      
 0.495
N303_14876
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
  
 0.486
N303_01193
Putative tRNA pseudouridine synthase Pus10.
      
 0.485
N303_15498
Brain-enriched guanylate kinase-associated protein.
      
 0.440
N303_05887
Pseudouridylate synthase 7.
   
  
 0.436
N303_14965
tRNA (Guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4.
   
  
 0.436
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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