STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_03875Diencephalon/mesencephalon homeobox protein 1-B. (362 aa)    
Predicted Functional Partners:
N303_14187
LIM domain-binding protein 1.
    
 0.599
N303_02783
LIM domain-binding protein 2.
    
 0.599
N303_15451
MADS-box domain-containing protein.
    
 0.588
N303_04905
Transcription factor E2-alpha.
    
  0.547
N303_07638
LIM/homeobox protein Lhx4.
   
 0.522
N303_06209
LIM/homeobox protein Lhx3.
   
 0.522
N303_12979
Serine/threonine-protein kinase SIK3.
      
 0.499
N303_03796
Homeobox protein engrailed-like.
   
0.496
N303_13499
Adenylate kinase 9.
    
  0.451
N303_13500
Adenylate kinase 9.
    
  0.451
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.