STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_13381TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L. (589 aa)    
Predicted Functional Partners:
N303_07357
Transcription initiation factor TFIID subunit 12.
   
 0.983
N303_01093
Transcription initiation factor TFIID subunit 6.
   
 0.981
N303_15150
Transcription initiation factor TFIID subunit 7.
    
 0.971
N303_11441
Transcription initiation factor TFIID subunit 8.
    
 0.971
N303_06676
Transcription initiation factor TFIID subunit 9.
    
 0.971
N303_13582
Transcription initiation factor TFIID subunit 11.
    
 0.971
N303_09130
Transcription initiation factor TFIID subunit 2.
    
 0.971
N303_15134
Transcription initiation factor TFIID subunit 1.
    
 0.970
N303_06890
Transcription initiation factor TFIID subunit 13.
    
 0.970
N303_10201
Transcription factor SPT20.
    
 0.960
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.