STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_04634Protein eyes shut. (573 aa)    
Predicted Functional Partners:
N303_06197
Neurogenic locus notch protein 1.
 
 
 0.956
N303_04633
Protein eyes shut.
 
    
0.904
N303_11565
Neurogenic locus notch protein 2.
 
      0.886
N303_04632
Protein eyes shut.
 
      0.880
N303_09387
Suppressor of hairless protein.
    
 0.809
N303_00790
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
0.752
N303_14112
Recombining binding protein suppressor of hairless-like.
    
 0.730
N303_03558
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
0.727
N303_08130
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
0.699
N303_15450
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.659
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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