STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_15040Tropomyosin alpha-1 chain; Belongs to the tropomyosin family. (284 aa)    
Predicted Functional Partners:
N303_01555
Myosin light chain 1, skeletal muscle isoform.
   
 0.902
N303_06465
Troponin T, cardiac muscle isoforms.
   
 0.895
N303_06464
Troponin I, slow skeletal muscle.
   
 0.876
N303_00176
Troponin T, fast skeletal muscle isoforms.
   
 0.868
N303_00180
Troponin I, fast skeletal muscle.
   
 0.855
N303_05692
Parkinson disease 7 domain-containing protein 1.
   
 0.832
N303_08660
Troponin C, slow skeletal and cardiac muscles.
   
 0.786
N303_05533
Myosin light polypeptide 6.
   
 0.781
N303_15234
Myosin-10; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.774
N303_14213
Alpha-centractin; Belongs to the actin family.
   
 0.770
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.