STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_15662Hepatic leukemia factor. (253 aa)    
Predicted Functional Partners:
N303_04288
Uncharacterized protein.
   
 0.881
N303_09723
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.854
N303_02860
Cyclic AMP-dependent transcription factor ATF-4.
   
 0.844
N303_08074
Uncharacterized protein.
   
 0.844
N303_13404
Cytochrome c oxidase assembly factor 6.
   
 0.841
N303_10637
Uncharacterized protein.
   
 0.834
N303_01412
Uncharacterized protein.
   
 0.820
N303_03548
Uncharacterized protein C1orf198.
   
 0.820
N303_01496
Single-stranded DNA cytosine deaminase.
   
 0.781
N303_06358
Cytochrome b-c1 complex subunit 7.
   
 0.753
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.