STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_05172Actin-binding LIM protein 1. (655 aa)    
Predicted Functional Partners:
N303_09363
Actin-binding LIM protein 2.
  
 
 
0.870
N303_03049
Actin-binding LIM protein 3.
  
  
0.838
N303_12215
Cell division control protein 42.
     
 0.835
N303_00383
Ras-related C3 botulinum toxin substrate 3.
     
 0.673
N303_13087
Ras-related C3 botulinum toxin substrate 1.
     
 0.673
N303_09879
Ras-related C3 botulinum toxin substrate 2.
     
 0.673
N303_13148
Beta-adducin.
   
 0.594
N303_01679
Gamma-adducin.
   
 0.594
N303_09381
Alpha-adducin.
   
 0.594
N303_08771
Sphingomyelin phosphodiesterase 4.
      
 0.519
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.