STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_04357E3 ubiquitin-protein ligase MGRN1. (517 aa)    
Predicted Functional Partners:
N303_05169
Attractin-like 1.
   
 
 0.692
N303_04517
Attractin.
   
 
 0.692
N303_06333
Ankyrin repeat domain-containing protein 46.
    
   0.598
N303_10592
Melanocyte-stimulating hormone receptor; Receptor for MSH (alpha, beta and gamma) and ACTH. The activity of this receptor is mediated by G proteins which activate adenylate cyclase; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.571
N303_00154
Tumor susceptibility 101.
    
 
 0.568
N303_08597
NEDD8-activating enzyme E1 catalytic subunit.
     
 0.542
N303_10785
DNA-directed RNA polymerase III subunit RPC10.
      
 0.530
N303_13095
DNA-directed RNA polymerase III subunit RPC5.
      
 0.497
N303_15629
E3 ubiquitin-protein ligase SMURF2.
   
 
 0.412
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.