STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_10417Ubiquitin carboxyl-terminal hydrolase CYLD. (935 aa)    
Predicted Functional Partners:
N303_06948
Tumor necrosis factor receptor superfamily member 1A.
    
 0.960
N303_03410
Receptor-interacting serine/threonine-protein kinase 1.
    
 0.948
N303_02186
Polyubiquitin-C.
   
 0.942
N303_11545
Ubiquitin-40S ribosomal protein S27a.
    
 0.937
N303_04620
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.936
N303_15335
Ubiquitin-60S ribosomal protein L40.
    
  0.913
N303_05352
Inhibitor of nuclear factor kappa-B kinase subunit epsilon.
   
 0.903
N303_03205
Sequestosome-1.
    
 0.877
N303_08509
Caspase-8; Belongs to the peptidase C14A family.
    
 0.869
N303_06218
TNF receptor-associated factor 2.
    
 0.867
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.