STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_07864Coiled-coil domain-containing protein 93. (586 aa)    
Predicted Functional Partners:
N303_04809
COMM domain-containing protein 10.
    
 
 0.900
N303_01268
COMM domain-containing protein 1.
   
 
 0.862
N303_14929
Down syndrome critical region protein 3.
    
 
 0.843
N303_13119
UPF0505 protein C16orf62.
    
 
 0.830
N303_11026
COMM domain-containing protein 2.
    
 
 0.824
N303_01720
COMM domain-containing protein 6.
   
 
 0.822
N303_07986
COMM domain-containing protein 5.
    
 
 0.814
N303_14420
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.796
N303_00236
COMM domain-containing protein 9.
    
 
 0.793
N303_07306
COMM domain-containing protein 8.
    
 
 0.792
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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