STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_00770snRNA-activating protein complex subunit 1. (315 aa)    
Predicted Functional Partners:
N303_15408
snRNA-activating protein complex subunit 3.
    
 0.998
N303_06202
snRNA-activating protein complex subunit 4.
    
 0.997
N303_11622
Transcription initiation factor IIB.
    
 0.951
N303_08419
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
    
  0.885
N303_08050
Transcription initiation factor IIA subunit 1.
    
  0.875
N303_03998
TATA-box-binding protein.
   
 0.861
N303_03555
TATA-box-binding protein.
   
 0.861
N303_04695
TATA box-binding protein-like 1.
   
 0.814
N303_12272
Stonin-1.
    
  0.786
N303_08331
Transcription factor TFIIIB component B.
    
 0.742
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.