STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_00166Solute carrier family 22 member 18. (412 aa)    
Predicted Functional Partners:
N303_00161
Oxysterol-binding protein; Belongs to the OSBP family.
   
  
 0.564
N303_00165
Pleckstrin homology-like domain family A member 2.
      
 0.551
N303_00164
Nucleosome assembly protein 1-like 4; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.506
N303_09380
Major facilitator superfamily domain-containing protein 10.
  
  
 0.502
N303_04581
Solute carrier family 22 member 16.
   
  
 0.414
N303_03403
Solute carrier family 22 member 23.
      
 0.407
N303_00169
Protein TSSC4.
      
 0.405
N303_00168
Transient receptor potential cation channel subfamily M member 5.
      
 0.400
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.