STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_12007Otolin-1. (290 aa)    
Predicted Functional Partners:
N303_09126
Collectin-10.
  
 
   0.558
N303_02454
Complement C1q subcomponent subunit C.
    
 
0.540
N303_10241
Histone-lysine N-methyltransferase SETDB2.
    
  0.496
N303_00421
Otopetrin-1.
      
 0.487
N303_07357
Transcription initiation factor TFIID subunit 12.
    
  0.481
N303_03233
SPARC.
   
 
 0.478
N303_10707
Transcription initiation protein SPT3.
    
  0.476
N303_06676
Transcription initiation factor TFIID subunit 9.
    
  0.471
N303_01093
Transcription initiation factor TFIID subunit 6.
    
  0.470
N303_10590
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.460
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.