STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_07743Histone deacetylase complex subunit SAP30L. (116 aa)    
Predicted Functional Partners:
N303_04012
AT-rich interactive domain-containing protein 4A.
    
 0.992
N303_13410
AT-rich interactive domain-containing protein 4B.
    
 0.992
N303_15052
Paired amphipathic helix protein Sin3b.
    
 0.879
N303_04280
Paired amphipathic helix protein Sin3a.
    
 0.879
N303_01790
Breast cancer metastasis-suppressor 1-like.
   
 0.878
N303_12428
Nuclear receptor corepressor 1.
    
 0.849
N303_09654
Retinitis pigmentosa 9 protein.
    
 0.832
N303_12690
Histone deacetylase 1.
    
 0.826
N303_11858
Histone deacetylase 2.
    
 0.826
N303_12673
Histone-binding protein RBBP4.
    
 0.796
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.