STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_00702Deoxyribodipyrimidine photo-lyase. (420 aa)    
Predicted Functional Partners:
N303_09559
Eukaryotic translation initiation factor 2-alpha kinase 3.
    
 0.782
N303_15517
Serine/threonine-protein kinase VRK1; Belongs to the protein kinase superfamily.
   
 0.671
N303_12616
Uncharacterized protein.
    
 0.670
N303_05395
Tau-tubulin kinase 2.
    
 0.670
N303_04436
Inactive serine/threonine-protein kinase VRK3.
    
 0.670
N303_00375
Casein kinase I isoform delta.
    
 0.670
N303_12252
Tau-tubulin kinase 1.
    
 0.670
N303_09907
Casein kinase I isoform epsilon.
    
 0.670
N303_14438
Lysine-specific demethylase 2B.
    
 0.648
N303_14812
Aryl hydrocarbon receptor nuclear translocator-like 2.
    
 0.644
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.