STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_07259Tetratricopeptide repeat protein 30A1. (497 aa)    
Predicted Functional Partners:
N303_02801
Tetratricopeptide repeat protein 26.
  
 
 0.992
N303_01466
Intraflagellar transport protein 52.
    
 0.992
N303_12014
Intraflagellar transport protein 80.
  
 
 0.991
N303_14445
Intraflagellar transport protein 81.
    
 0.988
N303_04379
Clusterin-associated protein 1.
   
 0.987
N303_03248
Intraflagellar transport protein 57.
   
 0.986
N303_10505
Intraflagellar transport protein 172.
   
 0.986
N303_10872
Intraflagellar transport protein 46.
    
 0.982
N303_08696
Choline dehydrogenase.
    
 0.963
N303_12104
Rab-like 5.
    
 0.945
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.