STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_08005Malignant T-cell-amplified sequence 1. (178 aa)    
Predicted Functional Partners:
N303_13568
Density-regulated protein; Belongs to the DENR family.
   
 
 0.989
N303_00350
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.946
OLA1
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
 
 
  
 0.908
N303_02207
Eukaryotic translation initiation factor 1b.
   
 
 0.862
N303_00612
Eukaryotic translation initiation factor 1.
   
 
 0.862
N303_13669
40S ribosomal protein S28.
    
   0.732
N303_00331
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.710
RPS3A
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
    
   0.701
N303_02045
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
   0.700
N303_09552
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
   0.694
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.