STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_13672E3 ubiquitin-protein ligase MARCH2. (236 aa)    
Predicted Functional Partners:
N303_04265
Spermatogenesis-associated protein 5.
    
 
 0.669
N303_04471
CCR4-NOT transcription complex subunit 2.
    
 
 0.663
N303_03855
FAS-associated factor 1.
    
 
 0.585
N303_03103
FAS-associated factor 2.
    
 
 0.585
N303_05212
Protein FAM132A.
    
 
 0.529
N303_05213
Ubiquitin-conjugating enzyme E2 J2.
    
 
 0.529
N303_14483
Von Hippel-Lindau disease tumor suppressor.
   
 
  0.499
N303_11779
Uncharacterized protein.
    
 
 0.491
N303_11038
Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.491
N303_07634
Syntaxin-6; Belongs to the syntaxin family.
    
 
 0.461
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.