STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_11690Protein FAM154B. (441 aa)    
Predicted Functional Partners:
N303_08760
Rhabdoid tumor deletion region protein 1.
   
 
 0.654
N303_10280
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
  0.651
N303_08845
Uncharacterized protein C15orf26.
   
 
 0.642
N303_15786
Leucine-rich repeat-containing protein 23.
   
 
 0.617
N303_04233
WD repeat-containing protein 16.
   
 0.614
N303_00197
AP-2 complex subunit alpha-2.
    
  0.607
N303_07651
ACB domain-containing protein.
    
  0.590
N303_06229
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8.
    
  0.587
N303_01297
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.582
N303_12567
Coiled-coil domain-containing protein 146.
   
 
 0.571
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.