STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_07536Rho guanine nucleotide exchange factor 28. (1007 aa)    
Predicted Functional Partners:
N303_12885
Rho-related GTP-binding protein RhoB.
   
 0.894
N303_04986
Rho-related GTP-binding protein RhoC.
   
 0.894
N303_08688
Transforming protein RhoA.
   
 0.894
N303_11307
Rho guanine nucleotide exchange factor 12.
    
0.860
N303_03698
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.783
N303_05272
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.783
N303_11406
Rho-related GTP-binding protein RhoE.
   
 0.776
N303_15612
Guanine nucleotide-binding protein subunit alpha-13.
    
 0.759
N303_13855
Focal adhesion kinase 1.
   
 
  0.759
N303_10157
Protein-tyrosine kinase 2-beta.
   
 
  0.759
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.