Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM8 | N303_02427 | A0A091GEL8 | A0A091GEW9 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Dynein assembly factor with WDR repeat domains 1. | 0.861 |
| LSM8 | N303_04488 | A0A091GEL8 | A0A091GF13 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein F. | 0.988 |
| LSM8 | N303_08768 | A0A091GEL8 | A0A091FPD1 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein Sm D3. | 0.988 |
| LSM8 | N303_10727 | A0A091GEL8 | A0A091FXW7 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | U4/U6 small nuclear ribonucleoprotein Prp3. | 0.996 |
| LSM8 | N303_11431 | A0A091GEL8 | A0A091G6Q9 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.990 |
| LSM8 | N303_12126 | A0A091GEL8 | A0A091G3E8 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA-processing-splicing factor 8. | 0.991 |
| LSM8 | N303_12838 | A0A091GEL8 | A0A091GEU7 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 116 kDa U5 small nuclear ribonucleoprotein component. | 0.992 |
| LSM8 | N303_13618 | A0A091GEL8 | A0A091FMX2 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.813 |
| LSM8 | N303_13688 | A0A091GEL8 | A0A091GH70 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like LSm7. | 0.998 |
| N303_02427 | LSM8 | A0A091GEW9 | A0A091GEL8 | Dynein assembly factor with WDR repeat domains 1. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.861 |
| N303_02427 | N303_04488 | A0A091GEW9 | A0A091GF13 | Dynein assembly factor with WDR repeat domains 1. | Small nuclear ribonucleoprotein F. | 0.857 |
| N303_02427 | N303_04609 | A0A091GEW9 | A0A091H9M5 | Dynein assembly factor with WDR repeat domains 1. | Sperm-associated antigen 16 protein. | 0.853 |
| N303_02427 | N303_08768 | A0A091GEW9 | A0A091FPD1 | Dynein assembly factor with WDR repeat domains 1. | Small nuclear ribonucleoprotein Sm D3. | 0.867 |
| N303_02427 | N303_10727 | A0A091GEW9 | A0A091FXW7 | Dynein assembly factor with WDR repeat domains 1. | U4/U6 small nuclear ribonucleoprotein Prp3. | 0.942 |
| N303_02427 | N303_11431 | A0A091GEW9 | A0A091G6Q9 | Dynein assembly factor with WDR repeat domains 1. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.864 |
| N303_02427 | N303_12126 | A0A091GEW9 | A0A091G3E8 | Dynein assembly factor with WDR repeat domains 1. | Pre-mRNA-processing-splicing factor 8. | 0.882 |
| N303_02427 | N303_12838 | A0A091GEW9 | A0A091GEU7 | Dynein assembly factor with WDR repeat domains 1. | 116 kDa U5 small nuclear ribonucleoprotein component. | 0.879 |
| N303_02427 | N303_13618 | A0A091GEW9 | A0A091FMX2 | Dynein assembly factor with WDR repeat domains 1. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.851 |
| N303_02427 | N303_13688 | A0A091GEW9 | A0A091GH70 | Dynein assembly factor with WDR repeat domains 1. | U6 snRNA-associated Sm-like LSm7. | 0.855 |
| N303_04488 | LSM8 | A0A091GF13 | A0A091GEL8 | Small nuclear ribonucleoprotein F. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.988 |
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