STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_05743Collagen and calcium-binding EGF domain-containing protein 1. (366 aa)    
Predicted Functional Partners:
N303_01078
Vascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family.
    
 0.652
N303_02824
BaffR-Tall_bind domain-containing protein.
    
 0.603
N303_11876
Tumor necrosis factor receptor superfamily member 17.
    
 0.602
N303_09408
Complement component C8 beta chain.
   
 0.557
N303_00809
Tumor necrosis factor receptor superfamily member 13B.
    
 0.553
N303_02838
PHD finger-like domain-containing protein 5A.
      
 0.532
N303_07477
Interleukin-1 receptor type 1.
    
  0.529
N303_07478
Interleukin-1 receptor type 1.
    
  0.529
N303_07474
Interleukin-1 receptor-like 1.
    
  0.529
N303_08592
Succinate-CoA ligase subunit beta.
      
 0.516
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.