STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_13100Uncharacterized protein C16orf52 B. (133 aa)    
Predicted Functional Partners:
N303_07344
G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.841
N303_02599
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.768
N303_13562
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2.
   
 0.768
N303_15735
RING finger protein 157.
      
 0.565
N303_04929
Procollagen galactosyltransferase 2.
 
      0.548
N303_13099
Von Willebrand factor A domain-containing protein 3A.
 
    
 0.524
N303_04958
Glycosaminoglycan xylosylkinase.
      
 0.502
N303_06801
Collagen alpha-1(XV) chain.
    
  0.454
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.