STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N303_04254Sodium channel and clathrin linker 1. (548 aa)    
Predicted Functional Partners:
N303_08709
Ras-related protein Rab-11A.
    
  0.590
N303_13671
Ras-related protein Rab-11B.
    
  0.590
N303_01883
Ras-related protein Rab-11A.
    
  0.590
N303_00384
Leucine-rich repeat-containing protein 45.
    
 
 0.584
N303_00208
P53-induced protein with a death domain.
    
 0.581
N303_04469
Rab-3A-interacting protein.
     
 0.577
N303_07404
Centrosomal protein of 89 kDa.
      
 0.575
N303_05395
Tau-tubulin kinase 2.
    
 0.573
N303_00333
Serine/threonine-protein kinase PLK3.
    
 0.568
N303_02506
Serine/threonine-protein kinase PLK2.
    
 0.568
Your Current Organism:
Cuculus canorus
NCBI taxonomy Id: 55661
Other names: C. canorus, common cuckoo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.